Difference between revisions of "PracticalInferenceSchedule"

 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
__NOTITLE__
+
{{DISPLAYTITLE:<span style="display: none">{{FULLPAGENAME}}</span>}}
 +
 
 +
= Schedule =
 +
 
 +
PDF with the doodle poll for scribe, report, and review [[Media:organisation.pdf | Doodle Poll]]
  
 
* Week 1  
 
* Week 1  
Line 6: Line 10:
 
      
 
      
 
* Week 2     
 
* Week 2     
** 8/31  Structure  Scribe
+
** 8/31  Structure  and Structurama
** [out of town] Read up about the method, and
+
** [out of town] Read up about the methods
  
 
* Week 3     
 
* Week 3     
Line 13: Line 17:
 
** 9/9 Tutorial of Structure     
 
** 9/9 Tutorial of Structure     
  
4     
+
* Week 4     
    9/14  dadi Scribe
+
** 9/14  dadi and eigensoft
    9/16  Tutorial  
+
** 9/16  Tutorial on dadi
    9/18  Tutorial  Report2 Review1 
+
 
5     
+
* Week 5     
    9/21  treemix Scribe
+
** 9/21  treemix
    9/23  Tutorial
+
** 9/23  Tutorial
    9/25  Tutorial Report3 Review2
+
 
6     
+
* Week 6     
    9/28  tess  Scribe
+
** 9/28  BAPS, TESS, Geneland
    9/30  Tutorial  
+
** 9/30  Tutorial  
    10/2  Tutorial  Report4 Review3
+
 
7     
+
* Week 7     
    10/5  Eigensoft Scribe
+
** 10/5  Sate, Pasta, ...
    10/7  Tutorial  
+
** 10/7  Tutorial  
    10/9  Tutorial  Report5 Review4
+
 
8     
+
* Week 8     
    10/12 Migrate  Scribe  Review5
+
** 10/12 Rev-Bayes
    --    Self-tutorial
+
** 10/14 Tutorial
    --    Self-tutorial All write a short report
+
 
9     
+
* Week 9     
    --    Finish writing report
+
** 10/19 [out of town]  Read articles about BEAST
    10/21 Migrate recap: Discussion about how to write a self-guided tutorial
+
** 10/21 BEAST Skyline (single locus) Methods and Tutorial
    10/23 Beast skyline  Scribe
+
 
10   
+
* Week 10   
    10/26 Tutorial
+
** 10/26 Beast SNAPP and SVDquartet
    10/28 Beast SNAPP Scribe
+
** 10/28 Tutorial  
    10/30 Tutorial Report6
+
 
11   
+
* Week 11   
    11/2  refbayes  Scribe
+
** 11/2  IMa
    11/4  Tutorial
+
** 11/4  Tutorial of IMa
    11/6  Tutorial  Report7 Review6
+
 
12   
+
* Week 12   
    11/9  IMa    Scribe
+
** 11/9  Migrate 
    --    Self-tutorial  
+
** 11/11 [out of town] Run the Migrate tutorial (we want to write a report that compares migrate and IMa results)
    --    Compare to migrate using a simulated dataset
+
 
13   
+
* Week 13   
    --    ALL: write a short report abot the migrate-ima comparison
+
** 11/16 [out of town] write a short report about the migrate-ima comparison
    11/18 fastsimcoal2 Scribe
+
** 11/18 fastsimcoal2, method and tutorial
    11/20 Tutorial 
+
 
14   
+
* Week 14   
    11/23 Tutorial  Report8 Review7
+
** 11/23 Discussion about ABC methods on general (fastsimcoal2 msBayes etc) 
    Thanksgiving
+
** 11/25 Thanksgiving Holiday
    Thanksgiving
+
 
15   
+
* Week 15   
    11/30 angsd     Scribe Review8
+
** 11/30 angsd
    12/2  Tutorial
+
** 12/2  Tutorial for angsd
    12/4  Tutorial 
 
finals week
 
</pre>
 

Latest revision as of 09:04, 19 September 2015


Schedule

PDF with the doodle poll for scribe, report, and review Doodle Poll

  • Week 1
    • 8/24 Intro and organisation
    • 8/26 Genepop/Isolation by distance/FST, short introduction about the methods and tutorial
  • Week 2
    • 8/31 Structure and Structurama
    • [out of town] Read up about the methods
  • Week 3
    • 9/7 Labor day no class
    • 9/9 Tutorial of Structure
  • Week 4
    • 9/14 dadi and eigensoft
    • 9/16 Tutorial on dadi
  • Week 5
    • 9/21 treemix
    • 9/23 Tutorial
  • Week 6
    • 9/28 BAPS, TESS, Geneland
    • 9/30 Tutorial
  • Week 7
    • 10/5 Sate, Pasta, ...
    • 10/7 Tutorial
  • Week 8
    • 10/12 Rev-Bayes
    • 10/14 Tutorial
  • Week 9
    • 10/19 [out of town] Read articles about BEAST
    • 10/21 BEAST Skyline (single locus) Methods and Tutorial
  • Week 10
    • 10/26 Beast SNAPP and SVDquartet
    • 10/28 Tutorial
  • Week 11
    • 11/2 IMa
    • 11/4 Tutorial of IMa
  • Week 12
    • 11/9 Migrate
    • 11/11 [out of town] Run the Migrate tutorial (we want to write a report that compares migrate and IMa results)
  • Week 13
    • 11/16 [out of town] write a short report about the migrate-ima comparison
    • 11/18 fastsimcoal2, method and tutorial
  • Week 14
    • 11/23 Discussion about ABC methods on general (fastsimcoal2 msBayes etc)
    • 11/25 Thanksgiving Holiday
  • Week 15
    • 11/30 angsd
    • 12/2 Tutorial for angsd