Difference between revisions of "ISC-5317"

 
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* [[Syllabus]]
 
* [[Syllabus]]
*Last lecture and notes: [http://peterbeerli.com/classdata/ISC5317/082917_trees.pdf  802917_trees.pdf],[http://peterbeerli.com/classdata/ISC5317/082917_notes.pdf  802917_notes.pdf]  
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<!-- *Last lecture and notes:  [http://peterbeerli.com/classdata/ISC5317/091917_besttree.pdf  091917_bestree.pdf], [http://peterbeerli.com/classdata/ISC5317/091917_notes.pdf  091917-besttree_notes.pdf]
*Current notes: [http://peterbeerli.com/classdata/ISC5317/090517-parsimony.pdf  090517-parsimony.pdf]  
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*Last lecture and notes:  [http://peterbeerli.com/classdata/ISC5317/092117_mutation1.pdf  092117_mutation1.pdf], [http://peterbeerli.com/classdata/ISC5317/092117_notes.pdf  092117_notes.pdf]
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*Last lecture and notes:  [http://peterbeerli.com/classdata/ISC5317/092617_mutation2.pdf  092617_mutation2.pdf], [http://peterbeerli.com/classdata/ISC5317/092617_notes.pdf  092617_notes.pdf]
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*Last lecture and notes:  [http://peterbeerli.com/classdata/ISC5317/092817_likehandout.pdf  092817_likehandout.pdf], [http://peterbeerli.com/classdata/ISC5317/092817_notes.pdf  092817_notes.pdf] 
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*Last lecture and notes:  [http://peterbeerli.com/classdata/ISC5317/092817_likehandout.pdf  092817_likehandout.pdf], [http://peterbeerli.com/classdata/ISC5317/100317_notes.pdf  100317_notes.pdf] -
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*Last lecture and notes: [http://peterbeerli.com/classdata/ISC5317/100517_bayeshandout.pdf  100517_bayeshandout.pdf], [http://peterbeerli.com/classdata/ISC5317/100517_notes.pdf  100517_notes.pdf]  
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*Current lecture and notes: Same as last lecture notes (continue)
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*Last few lecture:  [http://peterbeerli.com/classdata/ISC5317/coalescence1.pdf  coalescence1.pdf] ,
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[http://peterbeerli.com/classdata/ISC5317/coalescence2.pdf  coalescence2.pdf]
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*Current lecture:  [http://peterbeerli.com/classdata/ISC5317/Laura_Kubatko_speciestree_mbl2017.pdf Laura_Kubatko_speciestree_mbl2017.pdf] 
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*Last three lectures:  [http://peterbeerli.com/classdata/ISC5317/Laura_Kubatko_speciestree_mbl2017.pdf Laura_Kubatko_speciestree_mbl2017.pdf], [http://peterbeerli.com/classdata/ISC5317/modelselection.pdf modelselection.pdf], [http://peterbeerli.com/classdata/ISC5317/bootstrap.pdf bootstrap.pdf], [http://phylo.bio.ku.edu/mephytis/boot-sample.html Mark Holder's bootstrap example]  -->
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* [http://peterbeerli.com/classdata/ISC5317 Lectures]
 
* [http://peterbeerli.com/classdata/ISC5317 Lectures]
* [http://peterbeerli.com/classdata/ISC5317/assignments Assignments]
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<!-- * [http://peterbeerli.com/classdata/ISC5317/assignments Assignments] -->
 
* [http://peterbeerli.com/classdata/ISC5317/codes Codes]
 
* [http://peterbeerli.com/classdata/ISC5317/codes Codes]
 
* [[Heroes]]
 
* [[Heroes]]

Latest revision as of 05:24, 26 August 2019

Compevol.png

Advanced computational methods are becoming increasingly important in biology. A wide range of applications — including, for instance, identifying pathogens, tracing viral transmission pathways, and reconstructing the geographic expansion of humans out of Africa — rely on evolutionary inference. This course will cover the methods currently used for evolutionary inference, the stochastic models and inference principles they are based on, and how they are implemented in practice.


We meet in room 422 in Dirac

Current class notes


Old class notes